[LU-16017] Suboptimal dnode size used for ZFS Created: 15/Jul/22  Updated: 23/Sep/22

Status: Open
Project: Lustre
Component/s: None
Affects Version/s: Upstream, Lustre 2.15.0
Fix Version/s: None

Type: Bug Priority: Minor
Reporter: Brian Behlendorf Assignee: Brian Behlendorf
Resolution: Unresolved Votes: 0
Labels: llnl, zfs
Environment:

Any Lustre filesystem using ZFS-based servers.


Issue Links:
Related
Epic/Theme: zfs
Severity: 3
Epic: metadata, performance, server, zfs
Rank (Obsolete): 9223372036854775807

 Description   

When allocating new objects for a ZFS-based server the dnode should be sized large enough to store all of the base Lustre extended attributes (trusted.lma, trusted.fid, trusted.version) in order to avoid requiring a spill block.  In practice, this means a minimum size of 1K is required to accommodate the packed xattr nvlist in the bonus area.

> zdb -e -p /tmp/ -dddd lustre-ost1/ost1 1500

Dataset lustre-ost2/ost2 [ZPL], ID 391, cr_txg 8, 18.8M, 614 objects, rootbp DVA[0]=<0:16440a00:200> DVA[1]=<0:ada00:200> [L0 DMU objset] fletcher4 lz4 unencrypted LE contiguous unique double size=1000L/200P birth=89L/89P fill=614 cksum=dd5e644f1:50403505c9e:f29fa6075ec6:1fd1540cabc5f5

    Object  lvl   iblk   dblk  dsize  dnsize  lsize   %full  type
      1500    1   128K    64K    64K      1K    64K  100.00  ZFS plain file
                                               356   bonus  System attributes
        dnode flags: USED_BYTES USERUSED_ACCOUNTED USEROBJUSED_ACCOUNTED
        ...

        SA xattrs: 204 bytes, 3 entries

                trusted.lma = \010\000\000\000\000\000\000\000\000\000\001\000\001\000\000\000\360\000\000\000\000\000\000\000
                trusted.fid = \001\004\000\000\002\000\000\000\335\001\000\000\000\000\000\000\000\000\020\000\001\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000\000
                trusted.version = \357\000\000\000\001\000\000\000

However, by default 512b dnodes are created forcing a spill block to be allocated for each object which significantly increases the required storage and reduces performance due to the additional I/O.

It appears the issue is caused by OSD_BASE_EA_IN_BONUS being set incorrectly.  This value needs to account not just for the data size (which it does), but also for the xattr key text and XDR encoding overhead for the packed nvlist.  After everything is taken in to account the correct size is 204 bytes according to zdb.

It seems to me the correct fix here is to update OSD_BASE_EA_IN_BONUS accordingly.  Making the follow change fixes the issue in my testing.  It'd be great if someone else could review this change to make sure additional changes aren't needed.

+/*
+ * The base extended attribute SA size including the keys, values,
+ * and XDR encoding overhead as reported by zdb.
+ *
+ * SA xattrs: 204 bytes, 3 entries
+ *     trusted.lma = \000\000\000\000...
+ *     trusted.fid = \000\000\000\000...
+ *     trusted.version = \000\000\000...
+ */
+#define OSD_BASE_EA_IN_BONUS   (ZFS_SA_BASE_ATTR_SIZE + 204)

Until a fix is merged a reasonable workaround for this is to explicitly set the dnodesize property for the ZFS datasets to 1K on pools containing OSTs, and possibly larger on pools containing MDTs.

zfs set dnodesize=1k pool/ost



 Comments   
Comment by Olaf Faaland [ 15/Jul/22 ]

Brian, I believe that sites with large large layouts due to striping over large OST counts or due to use of PFL (we use it) will need much more space than that. I'm gathering a sample from one of our newer OCF file systems to get a sense of it.

Comment by Olaf Faaland [ 16/Jul/22 ]

A very brief sample from one of our file systems found that zdb reports between 1028 and 1076 bytes used for SA xattrs, for about 95% of objects of type "ZFS plain file", on an MDT. Some of those could be objects created and used internally by Lustre, but I believe most are not

Sampled from MDT0001 on CZlustre2

  count   dnodesize
 650274 1K
1157816 512

The most commonly seen sizes for SA xattrs were:

count    size
 257173 SA xattrs bytes 1064
 238096 SA xattrs bytes 1052
 210535 SA xattrs bytes 1040
 198597 SA xattrs bytes 1044
 145498 SA xattrs bytes 1060
 134837 SA xattrs bytes 1056
 128782 SA xattrs bytes 1036
 116194 SA xattrs bytes 1048
  96032 SA xattrs bytes 1072
  71828 SA xattrs bytes 1068
  51614 SA xattrs bytes 1032
  51206 SA xattrs bytes 1028
  35392 SA xattrs bytes 1076

I haven't looked at an OST yet.

Comment by Brian Behlendorf [ 16/Jul/22 ]

Assuming a 1k dnode it looks like we've got  476 byes of bonus space still available for an OST regular file object and 336 bytes available for an MDT regular file object.  How much space does a PFL layout typically need?

Then it sounds like 1k dnodes are sized reasonably for the OSTs to avoid wasting space, but we probably want to go larger by default of the MDTs.  The code automatically sizes the dnode based on the expected xattr size so it seems we'll need to teach it about those additional MDT xattrs.

Comment by Andreas Dilger [ 16/Jul/22 ]

Brian, it would probably be best for review if you pushed a patch that embodied your change.

That said, it would be preferable IMHO if the change used "sizeof(foo)" instead of a fixed number, possibly with a fudge-factor (2x or 7/4 or whatever) to compensate for encoding and other overhead.

Comment by Brian Behlendorf [ 19/Jul/22 ]

Right, I'll push a proper patch to for review in the next couple of days.  I'm happy to structure it as you suggested.

Comment by Olaf Faaland [ 19/Jul/22 ]

For my reference, our local ticket is TOSS5732

Comment by Alexander Boyko [ 29/Aug/22 ]

Hi behlendorf, I see that you was going to prepare a fix. Was it pushed ? I don't see any link here.
Thanks.

Comment by Olaf Faaland [ 29/Aug/22 ]

Hi Alexander, I took this over from Brian and haven't pushed a patch yet. Probably later today.

Comment by Cory Spitz [ 23/Sep/22 ]

ofaaland, were you still planning to push a patch?

Comment by Gerrit Updater [ 23/Sep/22 ]

"Olaf Faaland <faaland1@llnl.gov>" uploaded a new patch: https://review.whamcloud.com/48646
Subject: LU-16017 osd-zfs: OSD_BASE_EA_IN_BONUS should include names
Project: fs/lustre-release
Branch: master
Current Patch Set: 1
Commit: 010a36889fc430d498b3b0dfb41838aaf8aae024

Comment by Olaf Faaland [ 23/Sep/22 ]

Cory and Alexander, sorry that took so long.  Reviews appreciated.

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